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I'm having the same problem with the same model. The heater was working fine until I had a new radiator installed recently. I've been told that crud from the old radiator has probably clogged the heater core. From the engine, remove the hoses going into the fire wall. Turn your ignigtion on but do not crank. Turn the heater to on. Take a garden hose, preferably the cone shaped, twist action kind, and put the tip in the end of one heater hose and turn on the water but not too high because too much pressure could blow a hole in the heater core. The water should break up the debris. Repeat through the other hose.

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Q: The heater core is most likely plugged on my 2000 2000 Jeep Wrangler. How do you back flush?
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